Package: OTUtable 1.1.2

OTUtable: North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions

Analyses of OTU tables produced by 16S rRNA gene amplicon sequencing, as well as example data. It contains the data and scripts used in the paper Linz, et al. (2017) "Bacterial community composition and dynamics spanning five years in freshwater bog lakes," <doi:10.1128/mSphere.00169-17>.

Authors:Alexandra Linz

OTUtable_1.1.2.tar.gz
OTUtable_1.1.2.zip(r-4.5)OTUtable_1.1.2.zip(r-4.4)OTUtable_1.1.2.zip(r-4.3)
OTUtable_1.1.2.tgz(r-4.4-any)OTUtable_1.1.2.tgz(r-4.3-any)
OTUtable_1.1.2.tar.gz(r-4.5-noble)OTUtable_1.1.2.tar.gz(r-4.4-noble)
OTUtable_1.1.2.tgz(r-4.4-emscripten)OTUtable_1.1.2.tgz(r-4.3-emscripten)
OTUtable.pdf |OTUtable.html✨
OTUtable/json (API)

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

20 exports 1.00 score 0 dependencies 3 mentions 51 scripts 157 downloads

Last updated 6 years agofrom:a15e4506ce. Checks:OK: 7. Indexed: yes.

Exports:bog_subsetchao1clean_mothur_taxonomyclean_sharedclean_TaxAss_taxonomycombine_otusextract_datefilter_taxagrab_groupmake_do_matrixmake_temp_matrixobs_richnesspielouplot_columnreduce_namesremove_repsrotateshannonyear_subsetzscore

Dependencies: